Lecture Description
Professor McBride begins by using previous examples of "pathological" bonding and the BH3 molecule to illustrate how a chemist's use of localized bonds, vacant atomic orbitals, and unshared pairs to understand molecules compares with views based on the molecule's own total electron density or on computational molecular orbitals. This lecture then focuses on understanding reactivity in terms of the overlap of singly-occupied molecular orbitals (SOMOs) and, more commonly, of an unusually high-energy highest occupied molecular orbital (HOMO) with an unusually low-energy lowest unoccupied molecular orbital (LUMO). This is shown to be a generalization of the traditional concepts of acid and base. Criteria for assessing reactivity are outlined and illustrated.
Course Description
This is the first semester in a two-semester introductory course focused on current theories of structure and mechanism in organic chemistry, their historical development, and their basis in experimental observation. The course is open to freshmen with excellent preparation in chemistry and physics, and it aims to develop both taste for original science and intellectual skills necessary for creative research.
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Lecture Resources
Course Index
- How Do You Know: Divine or Human Authority vs Logic and Experiment
- Force Laws, Lewis Structures and Resonance
- Double Minima, Earnshaw's Theorem, and Plum-Puddings
- Coping with Smallness and Scanning Probe Microscopy
- X-Ray Diffraction
- Seeing Bonds by Electron Difference Density
- Quantum Mechanical Kinetic Energy
- One-Dimensional Wave Functions
- Chladni Figures and One-Electron Atoms
- Reality and the Orbital Approximation
- Orbital Correction and Plum-Pudding Molecules
- Overlap and Atom-Pair Bonds
- Overlap and Energy-Match
- Checking Hybridization Theory with XH3
- Chemical Reactivity: SOMO, HOMO, and LUMO
- Recognizing Functional Groups
- Reaction Analogies and Carbonyl Reactivity
- Amide, Carboxylic Acid and Alkyl Lithium
- Oxygen and the Chemical Revolution (Beginning to 1789)
- Rise of the Atomic Theory (1790-1805)
- Berzelius to Liebig and Wöhler (1805-1832)
- Radical and Type Theories (1832-1850)
- Valence Theory and Constitutional Structure (1858)
- Determining Chemical Structure by Isomer Counting (1869)
- Models in 3D Space (1869-1877); Optical Isomers
- Van't Hoff's Tetrahedral Carbon and Chirality
- Communicating Molecular Structure in Diagrams and Words
- Stereochemical Nomenclature; Racemization and Resolution
- Preparing Single Enantiomers and the Mechanism of Optical Rotation
- Esomeprazole as an Example of Drug Testing and Usage
- Preparing Single Enantiomers and Conformational Energy
- Stereotopicity and Baeyer Strain Theory
- Conformational Energy and Molecular Mechanics
- Sharpless Oxidation Catalysts and the Conformation of Cycloalkanes
- Understanding Molecular Structure and Energy through Standard Bonds
- Bond Energies, the Boltzmann Factor and Entropy
- Potential Energy Surfaces, Transition State Theory and Reaction Mechanism